EMBL WWW Services

• Biological Information Services

• Computational Services

• Software Documentation and On-line Help

• Supercomputing Resource for Molecular Biology

• Local Servers

• Search Engines for WWW (Service of University of Geneve)

Biological Information Services

• Automated analysis of the Yeast genome by Genequiz

• Automated analysis of the complete Haemophilus Influenzae genome by Genequiz

• EMBL Anonymous FTP server (ftp.embl-heidelberg.de)

• Cell Biophysics Programme Anonymous FTP server (ftp.pi.embl-heidelberg.de)

• EMBL Gopher Server (gopher.embl-heidelberg.de)

• Molecular Biology Databases(ftp.embl-heidelberg.de)

• Database of Molecular Biology Software(www.ebi.ac.uk)

• Submit your sequence to EMBL Sequence Data Base (www.ebi.ac.uk)

• Molecular Biology and Bioinformations WWW reach sampler (www2.pasteur.fr)

Computational Services developed and offered by EMBL

• AG 3D ALI: Database of aligned protein structures and related sequences

• AG ASC: Analytic Surface Calculation tools for molecular systems

• AG CLUSPROT: Delineation of spatial clusters in protein structures on the basis of atomic contacts between residues

• AG OBSTRUCT: Obtain a largest non-redundant set of protein structures from PDB according to crystallographic resolution and sequence identity

• AG PREDATOR: Protein secondary structure prediction from single sequence

• AG REPRO: Recognition of distant repeats in protein sequences

• AG SRSWWW: Network Browser for Databanks in Molecular Biology

• AG SSCP: Secondary structural content prediction from amino acid composition

• AG SSPRED: Prediction of secondary structures of proteins

• AG STRIDE: Knowledge - based protein secondary structure assignment from atomic coordinates

• AG TMAP: Prediction of transmembrane segments in proteins using the extended information in multiple sequence alignments

• BIOTECH: Protein structure verification

• BLAST (Test version,only for EMBL users)

• DALI: Comparison of protein structures in 3D

• FASTA and TFASTA (Test version, only for EMBL users)

• PredictProtein MaxHom : multiple sequence alignment

• PredictProtein EvalSec : evaluation of prediction accuracy

• PredictProtein PHDsec : prediction of secondary structure

• PredictProtein PHDacc : prediction of residue solvent accessibility

• PredictProtein PHDhtm : prediction of transmembrane helices

• PredictProtein TOPITS : prediction-based threading

• PROPSEARCH: Compositional search using a sequence

• PROPSEARCH: Compositional search using experimental Amino Acid Analysis data

• Database Query/Retrieval (Hinxton Outstation)

• Sequence Similarity Searches (Hinxton Outstation)

Software Documentation

Software Packages

• WHAT IF Documentation

Local servers

• EMBL Virus Structure Resource (Fuller Group)
• Sander Group
• NMR Group
• The Photolab

Author: webmaster